High-Protein Pepperoni Breakfast Cups

Featured in: Party Food Ideas

These savory breakfast cups combine fluffy eggs with classic pizza flavors for a protein-packed morning meal. The egg-yogurt base creates an incredibly light, tender texture while pepperoni, mozzarella, and Italian herbs deliver that familiar pizzeria taste.

Baked in a muffin tin, individual portions emerge golden and puffed—ideal for meal prep or busy weekdays. Simply prep the filling, whisk the egg mixture, pour, and bake. Each cup delivers 10 grams of protein with minimal carbs.

Store refrigerated for up to four days and reheat in minutes for a satisfying breakfast that tastes like weekend pizza but fuels like a nutritious start to your day.

Updated on Sun, 08 Feb 2026 07:02:40 GMT
Golden-brown High-Protein Pepperoni Breakfast Cups peek out of a muffin tin, revealing melted mozzarella and pepperoni inside. Save to Pinterest
Golden-brown High-Protein Pepperoni Breakfast Cups peek out of a muffin tin, revealing melted mozzarella and pepperoni inside. | chomzo.com

High-Protein Pepperoni Breakfast Cups are a savory, protein-packed start to your day. These pizza-inspired treats feature a delicious filling of pepperoni and cheese baked into fluffy egg-and-yogurt frittatas, making them a perfect choice for meal prep or a hearty breakfast on the go.

Golden-brown High-Protein Pepperoni Breakfast Cups peek out of a muffin tin, revealing melted mozzarella and pepperoni inside. Save to Pinterest
Golden-brown High-Protein Pepperoni Breakfast Cups peek out of a muffin tin, revealing melted mozzarella and pepperoni inside. | chomzo.com

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By combining eggs with Greek yogurt and whole milk, the base of these frittatas becomes exceptionally light and airy, providing a nutritious canvas for the zesty pepperoni and herb filling.

Ingredients

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  • Egg Base: 8 large eggs, 1/2 cup Greek yogurt (plain, nonfat or 2%), 1/4 cup whole milk, 1/2 tsp kosher salt, 1/4 tsp freshly ground black pepper.
  • Pizza Roll Filling: 3/4 cup mini pepperoni slices (or regular pepperoni, chopped), 1 cup shredded mozzarella cheese, 1/4 cup grated Parmesan cheese, 1/2 cup pizza sauce, 1/4 cup diced bell pepper (red or green), 1/4 cup finely diced red onion, 1/2 tsp dried Italian herbs (basil, oregano, thyme).

Instructions

Step 1
Preheat your oven to 375°F (190°C) and lightly grease a 12-cup muffin tin with nonstick spray or oil.
Step 2
In a large bowl, whisk together the eggs, Greek yogurt, milk, salt, and pepper until the mixture is smooth and well combined.
Step 3
In a separate bowl, mix together the mini pepperoni, mozzarella, Parmesan, pizza sauce, bell pepper, red onion, and Italian herbs.
Step 4
Divide the pizza roll filling evenly among the muffin cups, then pour the egg mixture over the filling until each cup is 3/4 full.
Step 5
Gently stir each cup with a fork to ensure the filling is distributed throughout the egg base.
Step 6
Bake for 18–22 minutes, or until the frittatas are puffed, set, and lightly golden on top.
Step 7
Let the cups cool in the tin for 5 minutes, then run a knife around the edges to carefully remove them.

Zusatztipps für die Zubereitung

To ensure the breakfast cups release easily from the tin, make sure to grease the muffin cups thoroughly. Whisking the yogurt well into the egg base is key to achieving a consistent, fluffy texture.

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Varianten und Anpassungen

You can easily customize these by substituting turkey pepperoni or chopped cooked sausage for the traditional pepperoni. For a lighter version, use part-skim mozzarella, or add extra nutrients by mixing in chopped spinach or mushrooms.

Serviervorschläge

Serve these breakfast cups warm for the best flavor. They can be stored in the refrigerator for up to 4 days and are easily reheated in the microwave for a convenient morning meal.

Steam rises from a split High-Protein Pepperoni Breakfast Cup, showing fluffy egg and yogurt frittata with pizza sauce. Save to Pinterest
Steam rises from a split High-Protein Pepperoni Breakfast Cup, showing fluffy egg and yogurt frittata with pizza sauce. | chomzo.com

Delicious, high-protein, and easy to customize, these Pepperoni Breakfast Cups bring the fun of pizza to your morning routine without the fuss.

Common Questions

Can I freeze these breakfast cups?

Yes, these freeze exceptionally well. Let cool completely, wrap individually in plastic wrap, and store in freezer bags for up to 2 months. Thaw overnight and reheat at 350°F for 10 minutes or microwave until warmed through.

What can I substitute for Greek yogurt?

Sour cream, cottage cheese blended smooth, or additional milk all work as alternatives. The yogurt adds tang and tenderness, so sour cream provides the closest match. For dairy-free options, try unsweetened coconut yogurt or silken tofu.

How do I know when they're fully baked?

The cups are done when they're puffed and set—no liquid egg should remain in the center. A knife inserted should come out clean, and the tops should be lightly golden. They'll deflate slightly as they cool, which is normal.

Can I make these vegetarian?

Absolutely. Replace pepperoni with diced bell peppers, mushrooms, olives, or plant-based pepperoni slices. Consider adding spinach or sun-dried tomatoes for extra flavor depth. The pizza-inspired profile works beautifully with veggie-forward adaptations.

Why use yogurt in the egg mixture?

Greek yogurt adds protein while creating an exceptionally tender, fluffy texture. The acidity activates the eggs' proteins differently than milk alone, resulting in lighter, more custard-like cups that stay moist even after reheating.

What's the best way to reheat leftovers?

Microwave on high for 30–45 seconds for a quick warm-up. For better texture, reheat in a 350°F oven for 8–10 minutes until hot throughout. Air fryers work beautifully too—4 minutes at 325°F restores that freshly-baked exterior.

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High-Protein Pepperoni Breakfast Cups

Savory egg cups with pepperoni, cheese, and Italian herbs. High-protein, low-carb breakfast ready in 35 minutes.

Prep Duration
15 minutes
Cook Duration
20 minutes
Time Needed
35 minutes
Author Maya Brooks


Skill Level Easy

Cuisine Type American

Makes 4 Portions

Dietary Info Low Carb

Required Ingredients

Egg Base

01 8 large eggs
02 1/2 cup plain nonfat or 2% Greek yogurt
03 1/4 cup whole milk
04 1/2 teaspoon kosher salt
05 1/4 teaspoon freshly ground black pepper

Pizza Roll Filling

01 3/4 cup mini pepperoni slices
02 1 cup shredded mozzarella cheese
03 1/4 cup grated Parmesan cheese
04 1/2 cup pizza sauce
05 1/4 cup diced red or green bell pepper
06 1/4 cup finely diced red onion
07 1/2 teaspoon dried Italian herbs

Preparation Steps

Step 01

Prepare Muffin Tin: Preheat oven to 375°F. Lightly grease a 12-cup muffin tin with nonstick spray or oil.

Step 02

Combine Egg Mixture: In a large bowl, whisk together eggs, Greek yogurt, milk, salt, and pepper until smooth and well combined.

Step 03

Mix Pizza Filling: In a separate bowl, combine mini pepperoni, mozzarella, Parmesan, pizza sauce, bell pepper, red onion, and Italian herbs.

Step 04

Distribute Filling: Divide the pizza roll filling evenly among the muffin cups.

Step 05

Add Egg Mixture: Pour the egg mixture over the filling in each muffin cup, filling each about three-quarters full.

Step 06

Distribute Ingredients: Gently stir each cup with a fork to distribute the filling throughout the egg base.

Step 07

Bake Frittatas: Bake for 18 to 22 minutes, or until the frittatas are puffed, set, and lightly golden on top.

Step 08

Cool and Remove: Let cool in the tin for 5 minutes, then run a knife around the edges and carefully remove. Serve warm.

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Tools Needed

  • 12-cup muffin tin
  • Mixing bowls
  • Whisk
  • Measuring cups and spoons
  • Knife and cutting board

Allergy Details

Look at the ingredient list to spot allergens. If you have questions, ask a healthcare provider.
  • Contains eggs
  • Contains milk and dairy products including Greek yogurt and cheese
  • Verify pepperoni and pizza sauce labels for gluten and other potential allergens

Nutrition Details (each portion)

These facts are just for your reference and not substitute for medical guidance.
  • Energy: 120
  • Fats: 7 g
  • Carbohydrates: 3 g
  • Proteins: 10 g

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